Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015929074.1_cds_XP_016476473.1_68300
CDS Infomation

[gene=LOC107798049] [db_xref=GeneID:107798049] [protein=vacuolar-processing enzyme-like] [protein_id=XP_016476473.1] [location=join(19508..19678,19789..19953,20114..20270,20410..20495,20685..20872,21542..21590,21866..22078,22445..22651,22860..22997)] [gbkey=CDS]
Sequence

ATGGTTCAAAAAAATGGTGTTGTTTCATTCCTAGTTGTACTTTTTGTCATAGTTTGTACT
GCTGAGGGTCGTAACTTGTTGGAGAGTATTGTTGAAGATGATAATGCGACTGGAACTAAA
TGGGCTGTGTTGGTAGCTGGATCAAATGAGTGGGATAATTACAGACACCAGGCGGATGTA
TGCCATGCATATCAACTACTGAAGAAAGGAGGTCTAAAAGATGAAAACATCATCGTATTC
ATGTACGACGATATTGCTTATAATAAAAACAACCCTAGACCTGGAGTCATCATCAATAGC
CCCCACGGCCATGATGTTTATAAAGGAGTCCCCAAGGATTACACAGGAAAAGATTGTAAT
GCTGATAACTTTTTCGCTGTTATCCTGGGAAACAAGAGTGCTCTAACTGGGGGCAGTGGA
AAAGTTGTGGAAAATGGTCCAAATGATTATATATTTATCTACTACGCTGACCACGGTGCT
CCTGGCCTTATTGGTATGCCTAGTGGAGATGATGTCTATGCCGACGATCTGATCAAAGTC
CTGATTAAAAAACACACTTTTGGGATATATTCCAAATTGGTATTTTACATGGAAGCTTGT
GAGTCTGGAAGTATGTTTGATGGTCTTCTCCCAAAAGGTTTGAACATTTACGTAACAACA
GCATCAAAGCCTGATGAGGGCAGTTGGGCTACATACTGTATTTCTTTAGGTGATGAAGAT
GTAGTCTGCTTAGGAGACTTGTACAGTGTTGCTTGGTTGGAGGATAGTGATTTGCACGAT
CGGCAAGTTGAAACTTTGGAGAAACAGTATCAGCTGGTTCGTAAGAGAACTCTAAATAAT
GGTACAGTCGAAGGCTCCCATGTCATGCAATATGGTGATTTACATATAAGTGAGGATCCT
CTTTTCAGATATATGGGTTCTAATTCTGCAAAAAATAGTTACTATAGTACTTCTACCAAC
GATGAGTCATGGCTACCCTCAAGGACTGTTAATCAGCGCGATGTTCATCTCATGCACTTA
TGGTCTAAGTTCCGGTCTGCTCCTGAAGGCTCTGCTAGAAAAACTGAAGCTCAAAGGCAA
TTAAGGGAAGCTATATCACAAAGAGAACACGTAGACAACAGTGTGAGACATATTGGAGAA
GTTTTGTTTGGAGTTGAGAAAGGTCCCGAGGTGCTGCAGACTGTTCGACCTGCTGGACAA
CCCCTCGTTGATGATTGGGACTGCCTTAAATCCTTTGTCAAGATATTTGAGTCACAATGT
GGAAAGCTAACTCCCTACGGAAGGAAACACGTTCGTGGCTTTGCTAACCTGTGCAATGCT
GGAATTCGAAGGGAGCAAATGGCTGCAGCAGCTAAACAAGCATGTCCTTCTTAA

Peptide Sequence

PEP ID

XP_016476473.1
PEP Infomation

PREDICTED: vacuolar-processing enzyme-like [Nicotiana tabacum]
Sequence

MVQKNGVVSFLVVLFVIVCTAEGRNLLESIVEDDNATGTKWAVLVAGSNEWDNYRHQADV
CHAYQLLKKGGLKDENIIVFMYDDIAYNKNNPRPGVIINSPHGHDVYKGVPKDYTGKDCN
ADNFFAVILGNKSALTGGSGKVVENGPNDYIFIYYADHGAPGLIGMPSGDDVYADDLIKV
LIKKHTFGIYSKLVFYMEACESGSMFDGLLPKGLNIYVTTASKPDEGSWATYCISLGDED
VVCLGDLYSVAWLEDSDLHDRQVETLEKQYQLVRKRTLNNGTVEGSHVMQYGDLHISEDP
LFRYMGSNSAKNSYYSTSTNDESWLPSRTVNQRDVHLMHLWSKFRSAPEGSARKTEAQRQ
LREAISQREHVDNSVRHIGEVLFGVEKGPEVLQTVRPAGQPLVDDWDCLKSFVKIFESQC
GKLTPYGRKHVRGFANLCNAGIRREQMAAAAKQACPS

Transcript Sequence

Gene sequence data has not been registered.